BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB029C08LP1|AL429037
(906 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1551 1162 0.0
3x_Contig1609 765 0.0
>3x_Contig1551
Length = 9073
Score = 1162 bits (586), Expect = 0.0
Identities = 599/602 (99%), Gaps = 1/602 (0%)
Strand = Plus / Minus
Query: 1 aataatgaatcagcaaagctaatcaatggtcaattgctgggaatcagagaaaactttacg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 aataatgaatcagcaaagctaatcaatggtcaattgctgggaatcagagaaaactttacg 543
Query: 61 aataccgccaggcgggaacaaacctgctaaaccagataaactactgtacgaataactaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 aataccgccaggcgggaacaaacctgctaaaccagataaactactgtacgaataactaaa 483
Query: 121 accaaccggctcacaagacctgtgtaaatatacactcgagcccatcttttctggcgtaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 accaaccggctcacaagacctgtgtaaatatacactcgagcccatcttttctggcgtaga 423
Query: 181 acatcattcccgacaaatgttttatttccgaagctttctcttcgaaaaatcccatttgct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 acatcattcccgacaaatgttttatttccgaagctttctcttcgaaaaatcccatttgct 363
Query: 241 tgaaagaagaaaagacgaaactgacatgttgacataatcataaatgcagtggt-caaaaa 299
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 362 tgaaagaagaaaagacgaaactgacatgttgacataatcataaatgcagtggttcaaaaa 303
Query: 300 cgtaatggagattaaggagcaacatagaacaacatacggccgctatgttctcagcggtaa 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 cgtaatggagattaaggagcaacatagaacaacatacggccgctatgttctcagcggtaa 243
Query: 360 tttgacacataatagacttgtgttgggtgcaatcgacaaaccagtatatttccgacaccc 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 tttgacacataatagacttgtgttgggtgcaatcgacaaaccagtatatttccgacaccc 183
Query: 420 cgatctttcaaaggatccatacttctatataaatatgattcactcattgagcttagacga 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 cgatctttcaaaggatccatacttctatataaatatgattcactcattgagcttagacga 123
Query: 480 aagttatgaatcccaacacgatgtgacatgaactcagcagcacagaagttgtcaatccac 539
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 aagtaatgaatcccaacacgatgtgacatgaactcagcagcacagaagttgtcaatccac 63
Query: 540 ataccatagcaacttttaggcagtctgttacagaaaagacaaataagttgagttacagca 599
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 62 ataccatagcaacttttaggcagtctgtaacagaaaagacaaataagttgagttacagca 3
Query: 600 aa 601
||
Sbjct: 2 aa 1
>3x_Contig1609
Length = 15966
Score = 765 bits (386), Expect = 0.0
Identities = 538/584 (92%), Gaps = 6/584 (1%)
Strand = Plus / Minus
Query: 326 gaacaacatacggccgctatgttctcagcggtaatttgacacataatagacttgtgttgg 385
||||||||| |||| |||||||||| |||||||||||||||||||| || |||| |||
Sbjct: 6965 gaacaacatgcggctgctatgttctgagcggtaatttgacacataacagtattgt--tgg 6908
Query: 386 gtgcaatcgacaaaccagtatatttccgacaccccgatctttcaaaggatccatacttct 445
||||||||||||||||| ||||||| |||||||| |||| ||| ||||||| ||||
Sbjct: 6907 gtgcaatcgacaaaccaagttatttcctacaccccggtcttctaaacgatccatgtttct 6848
Query: 446 atataaatatgattcactcattgagcttagacgaaagttatgaatcccaacacgatgtga 505
||| ||||||||||||| ||||||||||||| | || | ||||| || || ||||||
Sbjct: 6847 gtattaatatgattcacttattgagcttagacagatgtaa-gaatctcattactatgtga 6789
Query: 506 catgaa-ctcagcagcacagaagttgtcaatccacataccatagcaacttttaggcagtc 564
||||| |||||||||| ||||||| ||||||||||||| |||||||||||||||||||
Sbjct: 6788 tatgaagctcagcagcattgaagttgccaatccacataccgtagcaacttttaggcagtc 6729
Query: 565 tgttacagaaaagacaaataagttgagttacagcaaaggccctcgatctgacattaataa 624
||| ||| |||||| |||||||||| |||||| |||||||||||||||||||||| ||||
Sbjct: 6728 tgtaacaaaaaagaaaaataagttgggttacaacaaaggccctcgatctgacattcataa 6669
Query: 625 cagttgaaaatgtctgatttagagaagaaaccttcagtgacggagaaaacaatcc--aga 682
||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||
Sbjct: 6668 cagttgaaaatgtctgatttagagaaggaaccttcagtgacggagaaaacaatctcgaga 6609
Query: 683 ttccagacggtggatacggatgggttatcacatttgcattctttttgtacaatttttgta 742
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6608 ttccagacggtggatacggatgggttatcacatttgcattctttttgtacaatttttgta 6549
Query: 743 cctggggtgcaaatgctggttacgctgtataccttgctacatatttgtcccgtgatgtct 802
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6548 cctggggtgcaaatgctggttacgctgtataccttgctacatatttgtcccgtgatgtct 6489
Query: 803 ttcctggcggaggcaagctagattatgctgctattggtggtttagcatttggagtaggat 862
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6488 ttcctggcggaggcaagctagattatgctgctattggtggtttagcatttggagtaggat 6429
Query: 863 tattatttgcgccggtgattatatatttctctagaaattatgga 906
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6428 tattatttgcgccggtgattatatatttctctagaaattatgga 6385
Score = 355 bits (179), Expect = 1e-97
Identities = 255/279 (91%), Gaps = 1/279 (0%)
Strand = Plus / Minus
Query: 1 aataatgaatcagcaaagctaatcaatggtcaattgctgggaatcagagaaaactttacg 60
||||||| |||||||||||||||||||||||||||||||||| |||||||||| ||||||
Sbjct: 7281 aataatggatcagcaaagctaatcaatggtcaattgctgggattcagagaaaattttacg 7222
Query: 61 aataccgccaggcgggaacaaacctgctaaaccagataaactactgtacgaataactaaa 120
||||||||||||||||||| ||| |||||||||||||||| ||||| |||||||||||||
Sbjct: 7221 aataccgccaggcgggaacgaacatgctaaaccagataaattactgcacgaataactaaa 7162
Query: 121 accaaccggctcacaagacctgtgtaaatatacactcgagcccatcttttctggcgtaga 180
|| || ||||||||||| ||||||||||||||||||||||||||||||||| |||||||
Sbjct: 7161 actaatcggctcacaaggcctgtgtaaatatacactcgagcccatcttttcaagcgtaga 7102
Query: 181 acatcattcccgacaaatgttttatttccgaagctttctcttcgaaaaatcccatttgct 240
||| ||||||||||||| |||||||||||||||||| | || |||||| || ||| ||
Sbjct: 7101 acacaattcccgacaaatactttatttccgaagctttcccatccaaaaattcc-tttact 7043
Query: 241 tgaaagaagaaaagacgaaactgacatgttgacataatc 279
|||| ||||||||| ||||||||||||||||||||||||
Sbjct: 7042 tgaaggaagaaaaggcgaaactgacatgttgacataatc 7004
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6542
Number of Sequences: 1807
Number of extensions: 6542
Number of successful extensions: 35
Number of sequences better than 1.0e-20: 2
length of query: 906
length of database: 10,358,551
effective HSP length: 16
effective length of query: 890
effective length of database: 10,329,639
effective search space: 9193378710
effective search space used: 9193378710
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)